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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905674.1_cds_XP_016455938.1_49823
CDS Infomation

[gene=LOC107779946] [db_xref=GeneID:107779946] [protein=aspartyl protease AED3-like] [protein_id=XP_016455938.1] [location=complement(23047..24351)] [gbkey=CDS]
Sequence

ATGGCTTTAGCCATTGCTACATTCCTCTTCATTACTCTTCTTTCAACAAAAGCTTCAGCT
TTTGATTCATGTGCATCTACTAATGAAGATCTTTCAGTCATTCCCATTTATGGCAAATGC
TCACCTTTCAATACACCAAAACCTACTTCTTGGGAAAATACTGTTATCAACATGGCCTCA
AAAGATCCACAAAGGCTTTCTTATTTATCCAGTTTAGTGGACCAAAAGCCCAATTCAGCC
CCTATTGCTTCGGGCCAACAAGTATTCAACATTGGTAACTATGTTGTTCGGACCAAGATT
GGTACCCCGGGCCAGCTCTTGTTTATGGTCTTGGATACCAGTAGCGATACTGCATGGGTG
CCATGCAGTGGCTGCACCGGGTGCACCTCTACTATGTTTGCCCCGAACATGTCGTCGACT
TATGGGTCCACGGAATGTTCAGCACCCCAATGTACACAAGTCCGGGGACAATCTTGCCCC
GCTGGTGCACCGGGTGCTTGCTTTTTTAACCAATCTTATGGTGGCGCCTCATCATTCTAT
GCTACATTGTCTCGTGATGTTCTTAGACTAGGCACTGATGTTATACCGAATTATTCTTTT
GGGTGCATCAGTGCCATATCTGGGAGCTCAATTCCCCCTCAAGGGTTATTGGGCTTCGGT
CGGGGCTCCATGTCACTACTCTCACAATCAGCATCACTCTATTCGGGTGTATTCTCATAT
TGTTTACCAAGTTTCAAATCCTATTATTTCTCCGGATCACTCAAACTTGGTCCCTTGGGC
CAACCCAAGAATATTAAATTTACCCCACTTCTTAAGAACCCACACCGACCGTCTTTGTAC
TATGTGAACTTGACCGGTATAAGCGTGGGAAGAGTCCTAGTTCCAATAGCTCCTGAGCTC
CTAGCTTTCGACACGAATACCGGTGCGGGTACCATAATTGACTCGGGTACGGTCATTACC
CGATTCGTTCAGCCAGCTTATAATGCAACCCGGGATGAGTTCAGGAAACAAGTGAAAGGC
CCATTTAGCTCCTTGGGTGCATTTGACACATGCTTTGCATCAACAAATGAAGCAGTAGCA
CCAGCCATTACATTGCACTTCACAGGAATGGATTTAGTGCTGCCAATGGAGAACACTTTG
ATACACAGCAGTGCAAGTCCAGTGGCATGTTTGGCAATGGCAGCAGCACCAACCAATGTG
AACTCTGTGTTGAATGTTATAGCCAATTTGCAGCAGCAGAACCTCAGGATTTTGTTTGAC
ACTGCTAATTCTCGTTTGGGAATTGCTCGTGAACTTTGTAACTAG

Peptide Sequence

PEP ID

XP_016455938.1
PEP Infomation

PREDICTED: aspartyl protease AED3-like [Nicotiana tabacum]
Sequence

MALAIATFLFITLLSTKASAFDSCASTNEDLSVIPIYGKCSPFNTPKPTSWENTVINMAS
KDPQRLSYLSSLVDQKPNSAPIASGQQVFNIGNYVVRTKIGTPGQLLFMVLDTSSDTAWV
PCSGCTGCTSTMFAPNMSSTYGSTECSAPQCTQVRGQSCPAGAPGACFFNQSYGGASSFY
ATLSRDVLRLGTDVIPNYSFGCISAISGSSIPPQGLLGFGRGSMSLLSQSASLYSGVFSY
CLPSFKSYYFSGSLKLGPLGQPKNIKFTPLLKNPHRPSLYYVNLTGISVGRVLVPIAPEL
LAFDTNTGAGTIIDSGTVITRFVQPAYNATRDEFRKQVKGPFSSLGAFDTCFASTNEAVA
PAITLHFTGMDLVLPMENTLIHSSASPVACLAMAAAPTNVNSVLNVIANLQQQNLRILFD
TANSRLGIARELCN

Transcript Sequence

Gene sequence data has not been registered.